SplAdder is a tool to analyze alternative splicing using RNA-seq alignment data. The SplAdder algorithm uses annotation, and RNA-Seq read alignments, computes a splicing graph, and quantifies the splicing events that may be useful in differential analysis.
RNA-Seq; RNA splicing; Nucleic acid structure analysis
Kahles A, Ong CS, Zhong Y, Rätsch G "SplAdder: identification, quantification and testing of alternative splicing events from RNA-Seq data." Bioinformatics 2016; 32(12):1840-7 https://doi.org/10.1093/bioinformatics/btw076
PMID: 26873928
PMCID: PMC4908322
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