Trimmomatic

Trimmomatic is a tool for trimming Illumina sequenced data reads.

Topic

Sequencing; Sequence analysis; Data quality management

Cost

Maturity:

Credit: Bundesministerium für Bildung und Forschung (BMBF), BLE/BMELV Verbundprojekt.
Contact: Bjoern Usadel usadel _at_ bio1.rwth-aachen.de | Anthony M. Bolger bolger _at_ bio1.rwth-aachen.de
Collection: -

Bolger AM, Lohse M, Usadel B "Trimmomatic: a flexible trimmer for Illumina sequence data." Bioinformatics. 2014 Aug 1;30(15):2114-20. Epub 2014 Apr 1. https://doi.org/10.1093/bioinformatics/btu170
PMID: 24695404
PMCID: PMC4103590

Source: http://www.usadellab.org/cms/uploads/sup
plementary/Trimmomatic/Trimmomatic-S
rc-0.39.zip
Documentation: http://www.usadellab.org/cms/uploads/sup
plementary/Trimmomatic/TrimmomaticMa
nual_V0.32.pdf
Home page: http://www.usadellab.org/cms/index.php?p
age=trimmomatic

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