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UnoSeq

UnoSeq

UnoSeq is a tool to analyze expression profiles of organisms that lack genome and/or transcriptome information using Illumina RNA-seq data.

Topic

RNA-Seq; Sequence assembly

Details

  • Operation: Genome assembly; Sequence annotation
  • Software interface: Command-line user interface
  • Language: Java
  • Operating system: Linux; Mac OS X; Microsoft Windows
  • License: Other
  • Cost: Free for non-commercial use
  • Version name: -
  • Credit: Funding for open access charge: Boehringer Ingelheim Pharma GmbH & Co KG.
  • Contact: Fabian Birzele fabian.birzele _at_ boehringer-ingelheim.com | Jochen Schaub jochen.schaub _at_ boehringer-ingelheim.com
  • Collection: -

Publications

Birzele F, Schaub J, Rust W, Clemens C, Baum P, Kaufmann H, Weith A, Schulz TW, Hildebrandt T "Into the unknown: expression profiling without genome sequence information in CHO by next generation sequencing." Nucleic Acids Res. 2010; 38(12):3999-4010 https://doi.org/10.1093/nar/gkq116
PMID: 20194116
PMCID: PMC2896516


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