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Wx

Wx

Wx is a tool to select the optimal set of genes for gene expression. The Wx uses Keras (Python Deep Learning library) neural network to learn features and to generate a discriminative index.

Topic

RNA-seq; Sequence analysis; Genetic variation; Gene expression

Details

  • Operation: Classification
  • Input: csv
  • Output: -
  • Software interface: Command-line user interface; Web user interface
  • Language: R;Python
  • Operating system: Microsoft Windows, Mac OS X, Linux
  • License: The MIT License
  • Cost: Free
  • Version name: -
  • Maturity: Stable
  • Credit: The National R&D Program for Cancer Control, Ministry of Health & Welfare, Republic of Korea
  • Contact: Keunsoo Kang Kangk1204 _at_ dankook.ac.kr
  • Collection: -

Publications

Park S, Shin B, Sang Shim W, Choi Y, Kang K, Kang K "Wx: a neural network-based feature selection algorithm for transcriptomic data." Sci Rep. 2019 Jul 19;9(1):10500. https://doi.org/10.1038/s41598-019-47016-8
PMID: 31324856
PMCID: PMC6642261


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