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rpca

rpca

rpca (RobustPCA and Truncated RobustPCA) is a tool to decompose Matrices into Low-Rank and Sparse Components, and with Truncated RobustPCA using L2 noise.

Topic

RNA-Seq; Gene expression

Details

  • Operation: Dimensionality reduction
  • Software interface: Command-line user interface
  • Language: R
  • Operating system: Linux; Mac OS X; Microsoft Windows
  • License: GNU General Public License v>=2
  • Cost: Free
  • Version name: 0.3.2
  • Credit: Polish National Science Centre
  • Contact: k.gogolewski _at_ mimuw.edu.pl
  • Collection: -

Publications

Gogolewski K, Sykulski M, Chung NC, Gambin A "Truncated Robust Principal Component Analysis and Noise Reduction for Single Cell RNA Sequencing Data" Comput Biol. 2019 Aug;26(8):782-793 https://doi.org/10.1089/cmb.2018.0255
PMID: 31045436


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