A5 is a tool for automating genome assembly pipeline and it consists of 5 steps: cleaning reads, assemble error corrected reads, scaffolding, scaffold validation, and final scaffold assembly. It has automated parameter selection, which is useful to new users.
Sequence assembly
Tritt A, Eisen JA, Facciotti MT, Darling AE "An integrated pipeline for de novo assembly of microbial genomes." PLoS One. 2012;7(9):e42304. https://doi.org/10.1371/journal.pone.0042304
PMID: 23028432
PMCID: PMC3441570
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