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AutoSeqMan is a tool for assembling Sanger sequences into contigs for users working with the Seqman program. While the SeqMan program is an excellent GUI tool, when users have multiple sequences to assemble contigs, the manual process of clicking through the various functions can be time consuming. Using SeqMan scripting language, AutoSeqMan added two modules to classify and assemble sequences.


Sequence assembly


  • Operation: Sequence assembly; De-novo assembly
  • Input: ab1
  • Output: -
  • Software interface: Command-line user interface
  • Language: SeqMan scripting
  • Operating system: Microsoft Windows
  • License: Not stated
  • Cost: Free
  • Version name: 1.1.1
  • Credit: -
  • Contact: sunyanbo _at_
  • Collection: -


Jin JQ, Sun YB "AutoSeqMan: batch assembly of contigs for Sanger sequences." Zool Res. 2018 Mar 18;39(2):123-126.
PMID: 29515094
PMCID: PMC5885390

Download and documentation

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