Hapler is a tool for assembling sequences into haplotypes from population-sampled data. It is targeted for low-diversity and low-coverage data that are typical for ecological samples. This tool is able to construct consensus sequences and identify chimera.
Sequence analysis; Haplotype assembly
O'Neil ST, Emrich SJ "Haplotype and minimum-chimerism consensus determination using short sequence data." BMC Genomics. 2012 Apr 12;13 Suppl 2:S4. https://doi.org/10.1186/1471-2164-13-S2-S4
PMID: 22537299
PMCID: PMC3394418
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