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Mix is a tool for finishing genome assemblies by mixing multiple draft genomes with the goal to improve sequence contiguity. This tool does not require the use of a reference genome. It implements an extension graph based on contig ends and alignments among them.


Sequence assembly



Soueidan H, Maurier F, Groppi A, Sirand-Pugnet P, Tardy F, Citti C, Dupuy V, Nikolski M "Finishing bacterial genome assemblies with Mix." BMC Bioinformatics. 2013;14 Suppl 15:S16. 2013 Oct 15.
PMID: 24564706
PMCID: PMC3851838

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