WhatsHap is a tool for phasing long reads despite their higher sequencing error rates. It implements a fixed parameter tractable (FPT) approach to a weighted version of minimum error correction (wMEC) formulation. This tool is useful to users who want to perform haplotype assembly.
Sequence assembly
Patterson M, Marschall T, Pisanti N, van Iersel L, Stougie L, Klau GW, Schonhuth A "WhatsHap: Weighted Haplotype Assembly for Future-Generation Sequencing Reads." J Comput Biol. 2015 Jun;22(6):498-509. 6. https://doi.org/10.1089/cmb.2014.0157
PMID: 25658651
If you find errors, please report here.
SECTIONS
TutorialsFind thousands of Bioinformatics and Life Science software tools and databases in the newly launched
Ads