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miniasm is a tool for de novo assembly of long reads from either the PacBio or Oxford Nanopore platforms. It does not perform an error correction step. This tool is likely used in conjunction with minimap in order to generate all-vs-all reads mapping to be used as input for the assembly.


Sequence assembly



Li H "Minimap and miniasm: fast mapping and de novo assembly for noisy long sequences." Bioinformatics. 2016 Jul 15;32(14):2103-10. Epub 2016 Mar 19.
PMID: 27153593
PMCID: PMC4937194

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