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ICPLQuant
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ICPLQuant

ICPLQuant is a tool to analyze large mass-spectrometric data sets from ICPL, LC-MALDI based experimental proteomics data. The ICPLQuant algorithm 1. Executes ICPL multiplex detection, quantification, and lists peptides to be subsequently identified by MS/MS, 2. Couples MASCOT MS/MS protein identification with the quantitative data and provides a protein/peptide list containing the relevant information.



ICPLQuant

ICPLQuant is a tool to analyze large mass-spectrometric data sets from ICPL, LC-MALDI based experimental proteomics data. The ICPLQuant algorithm 1. Executes ICPL multiplex detection, quantification, and lists peptides to be subsequently identified by MS/MS, 2. Couples MASCOT MS/MS protein identification with the quantitative data and provides a protein/peptide list containing the relevant information.

Topic

Proteomics; Proteomics experiment

Details

  • Operation: Database search; Protein quantification; Protein identification; Isotope-coded protein label; Deisotoping; Target-Decoy; Quantification; Chromatogram visualisation; Labeled quantification
  • Input: XML (Peptide mass fingerprint, Mass spectrometry spectra) XML, Mascot .dat file (Peptide identification)
  • Output: xls (Expression data)
  • Software interface: Graphical user interface
  • Language: Java
  • Operating system: Linux; Mac OS X; Microsoft Windows
  • License: Other
    • Cost: Free
  • Version name: -
  • Credit: -
  • Contact: kellerma _at_ biochem.mpg.de
  • Collection: -

Publications

Lottspeich F, Kellermann J "ICPL labeling strategies for proteome research." Methods Mol. Biol. 2011 https://doi.org/10.1007/978-1-61779-148-2_4
PMID: 21604115


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