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XTandem Parser
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XTandem Parser

XTandem Parser is a tool to extract information from X!Tandem output XML files to a object model. XTandem Parser is available for use in Maven projects. For visualization, see PetideShaker.



XTandem Parser

XTandem Parser is a tool to extract information from X!Tandem output XML files to a object model. XTandem Parser is available for use in Maven projects. For visualization, see PetideShaker.

Topic

Proteomics; Proteomics experiment

Details

  • Operation: Data handling; Mass spectrum visualisation; Formatting
  • Software interface: Graphical user interface
  • Language: Java
  • License: Apache-2.0
    • Cost: Free
  • Version name: 1.13.0
  • Credit: The Ministerium fur Innovation, Wissenschaft, Forschung und Technologie des Landes Nordrhein-Westfalen, the Bundesministerium fur Bildung und Forschung.
  • Contact: lennart.martens _at_ UGent.be
  • Collection: -

Publications

Muth T, Vaudel M, Barsnes H, Martens L, Sickmann A "XTandem Parser: an open-source library to parse and analyse X!Tandem MS/MS search results." Proteomics. 2010 Apr;10(7):1522-4. https://doi.org/10.1002/pmic.200900759
PMID: 20140905


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