RaceID2_StemID2_package. RaceID is a tool for the identification of abundant cell types in single-cell RNA-seq (scRNA-seq) data. The RaceID algorithm uses unique molecular identifiers to compute the counts. See also a more recent version (links). StemID is a tool for the identification of stem cells in single-cell RNA-seq (scRNA-seq) data based on RaceID2 results. See also StemID2 and RaceID3 (links).
RNA-seq; Cell biology; Genetics; Regenerative medicine
Grün D, Muraro MJ, Boisset JC, Wiebrands K, Lyubimova A, Dharmadhikari G, van den Born M, van Es J, Jansen E, Clevers H, de Koning EJP, van Oudenaarden A "De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data." Cell Stem Cell. 2016 Aug 4;19(2):266-277. https://doi.org/10.1016/j.stem.2016.05.010
PMID: 27345837
PMCID: PMC4985539
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