A tool to view multiple sequence alignments (MSAs). The package includes R/Bioconductor interfaces for ClustalW, ClustalOmega, and Muscle together with the algorithms.
Sequence analysis; Sequence sites, features and motifs; Bioinformatics; Phylogenetics; Sequencing
Gómez J, García LJ, Salazar GA, Villaveces J, Gore S, García A, Martín MJ, Launay G, Alcántara R, Del-Toro N, Dumousseau M, Orchard S, Velankar S, Hermjakob H, Zong C, Ping P, Corpas M, Jiménez RC "BioJS: an open source JavaScript framework for biological data visualization." add https://doi.org/10.1093/bioinformatics/btt100
PMID: 23435069
PMCID: PMC3624812
Yachdav G, Wilzbach S, Rauscher B, Sheridan R, Sillitoe I, Procter J, Lewis SE, Rost B, Goldberg T "MSAViewer: interactive JavaScript visualization of multiple sequence alignments." Bioinformatics 2016; 32(22):3501-3503 https://doi.org/10.1093/bioinformatics/btw474
PMID: 27412096
PMCID: PMC5181560
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