For better experience, turn on JavaScript!

Instructions here


Multiple sequence alignment online

Multiple sequence alignment online


Press "Start". A sample alignment is loaded. Import your own alignment by pressing "import" button on the menu that will appear.

You may also be interested in the following

Pair-wise sequence alignment

Tutorials Main Page

Multiple alignment tools (MSA) and resources

Related tutorials

Pair-wise sequence alignment
Pair-wise sequence alignment methods
How to select the right substitution matrix?

References

Guy Yachdav, Sebastian Wilzbach, Benedikt Rauscher, Robert Sheridan, Ian Sillitoe, James Procter, Suzanna E. Lewis, Burkhard Rost, Tatyana Goldberg1 (Jul 2016). "MSAViewer: interactive JavaScript visualization of multiple sequence alignments." Bioinformatics. 2016 Nov 15; 32(22): 3501–3503. PMC

IUPAC-IUB Joint Commission on Biochemical Nomenclature. Nomenclature and Symbolism for Amino Acids and Peptides: Recommendations 1983. FEBS J. 1984, 138 (1), 9–37. DOI: 10.1111/j.1432-1033.1984.tb07877.x. HTML version.