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Tuiuiu

Tuiuiu

Tuiuiu is a software tool that filters multiple repeats using the criterion of edit distance. Tuiuiu is useful as a preprocessing step in the construction of multiple sequence alignments. Note that the home page is no longer accessible. Tuiuiu might be available from the authors of this software.

Topic

Sequence analysis

Details

  • Operation: Sequence analysis
  • Software interface: Web service
  • Language: -
  • License: Not stated
  • Cost: Free
  • Version name: -
  • Credit: -
  • Contact: support _at_ genouest.org; Pierre Peterlongo: pierre.peterlongo _at_ irisa.fr; Gustavo Akio Tominaga Sacomoto: sacomoto _at_ gmail.com; Alair Pereira do Lago: alair _at_ ime.usp.br; Nadia Pisanti: pisanti _at_ di.unipi.it; Marie-France Sagot: Marie-France.Sagot _at_ inria.fr
  • Collection: -

Publications

Peterlongo P, Sacomoto GA, do Lago AP, Pisanti N, Sagot MF "Lossless filter for multiple repeats with bounded edit distance." Algorithms Mol Biol 2009 https://doi.org/10.1186/1748-7188-4-3
PMID: 19183438
PMCID: PMC2661881


Download and documentation








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