equicktandem is a tool to detect nucleotide sequence sections that potentially contain repeats in tandem. The equicktandem algorithm identifies segments of sequences where bases match elsewhere in the sequence without gaps. The equicktandem algorithm scores each match with +1 and each mismatch with -1.
Sequence composition, complexity and repeats
Rice P, Longden I, Bleasby A "EMBOSS: the European Molecular Biology Open Software Suite." Trends Genet. 2000; 16(6):276-7 https://doi.org/10.1016/s0168-9525(00)02024-2
PMID: 10827456
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