supermatcher is a tool to compute approximate alignments between search sequences and the target sequences, for example, sequences in a database. The supermatcher algorithm determines likely matching sequences utilizing word matches and produces the sequence alignments using the Smith-Waterman local alignment method.
Nucleic acid structure analysis
Rice P, Longden I, Bleasby A "EMBOSS: the European Molecular Biology Open Software Suite." Trends Genet. 2000; 16(6):276-7 https://doi.org/10.1016/s0168-9525(00)02024-2
PMID: 10827456
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