A pipeline tool for detection and annotation of somatic copy number variation (CNV). The algorithm includes the following CNV detection methods: ExomeCNV, FREEC, ADTEx and EXCAVATOR.
Exome sequencing; Sequence analysis; DNA structural variation
Gao J, Wan C, Zhang H, Li A, Zang Q, Ban R, Ali A, Yu Z, Shi Q, Jiang X, Zhang Y "Anaconda: AN automated pipeline for somatic COpy Number variation Detection and Annotation from tumor exome sequencing data." BMC Bioinformatics. 2017 Oct 3;18(1):436 https://doi.org/10.1186/s12859-017-1833-3
PMID: 28974218
PMCID: PMC5627484
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