A tool to simulate haplotype-phased allele-specific copy number variation (CNV) into a Binary Alignment Mapping (BAM) and cancer CNVs in exome and targeted cell-free DNA sequencing data.
Genetics; genetic variation
Samadian S, Bruce JP, Pugh TJ "Bamgineer: Introduction of simulated allele-specific copy number variants into exome and targeted sequence data sets." PLoS Comput Biol. 2018 Mar 28;14(3):e1006080. eCollection 2018 Mar. https://doi.org/10.1371/journal.pcbi.1006080
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