CNVcaller is a tool for the detection of copy number variation (CNV) in large populations. Requirements: SAMtools 1.3 (using htslib 1.3), scikit-learn v0.19.0.
DNA structural variation; Genetic variation; Population genetics
Wang X, Zheng Z, Cai Y, Chen T, Li C, Fu W, Jiang Y "CNVcaller: highly efficient and widely applicable software for detecting copy number variations in large populations." Gigascience. 2017 Dec 1;6(12):1-12. https://doi.org/10.1093/gigascience/gix115
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