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CoNVaQ
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CoNVaQ

A web-based tool for copy number variation (CNV) - based association studies. CoNVaQ has two models: 1. Fisher's exact test and 2. A novel query-based model matching regions to user-defined queries.



CoNVaQ

A web-based tool for copy number variation (CNV) - based association studies. CoNVaQ has two models: 1. Fisher's exact test and 2. A novel query-based model matching regions to user-defined queries.

Topic

Pathology; DNA structural variation; Genetic variation; Genotype and phenotype

Details

  • Operation: Mutation detection
  • Software interface: R; Web application; Library
  • Language: R
  • Operating system: Linux; Mac OS X; Microsoft Windows
  • License: The MIT licence
    • Cost: Free
  • Version name: 0.1.3
  • Credit: B’s VILLUM Young Investigator grant nr. 13154.
  • Contact: sjlarsen _at_ imada.sdu.dk;jan.baumbach _at_ wzw.tum.de
  • Collection: -

Publications

Larsen SJ, do Canto LM, Rogatto SR, Baumbach J "CoNVaQ: a web tool for copy number variation-based association studies." BMC Genomics. 2018 May 18;19(1):369. https://doi.org/10.1186/s12864-018-4732-8
PMID: 29776329
PMCID: PMC5960125


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