GENSENG is a tool for detecting copy number variation (CNV). The algorithm uses a hidden Markov model and negative binomial regression for the identification of CNVs.
Genetics; genetic variation
Jin P. Szatkiewicz, WeiBo Wang, Patrick F. Sullivan, Wei Wang, Wei Sun "Improving detection of copy-number variation by simultaneous bias correction and read-depth segmentation" Nucleic Acids Research, Volume 41, Issue 3, 1 February 2013, Pages 1519–1532 https://doi.org/10.1093/nar/gks1363
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