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Nano-GLADIATOR
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Nano-GLADIATOR

Nano-GLADIATOR (Nanopore Genomic aLterations AnD allelIc frAcTiOn pRedictor) is a tool for detecting copy number variation (CNV) in nanopore sequencing data (MinION/GridION).



Nano-GLADIATOR

Nano-GLADIATOR (Nanopore Genomic aLterations AnD allelIc frAcTiOn pRedictor) is a tool for detecting copy number variation (CNV) in nanopore sequencing data (MinION/GridION).

Topic

Genetics; Genetic variation

Details

  • Operation: Variant detection
  • Software interface: Command-line user interface
  • Language: Perl
  • Operating system: Linux
  • License: Not stated
    • Cost: Free
  • Version name: 1.0
  • Credit: The Associazione Italiana per la Ricercasul Cancro, AIRC 5x1000 call "Metastatic disease: the key unmetneed in oncology" to MYNERVA project, 21267 (MYeloid NEoplasmsResearch Venture AIRC).
  • Contact: Alberto Magi albertomagi _at_ gmail.com
  • Collection: -

Publications

Magi A, Bolognini D, Bartalucci N, Mingrino A, Semeraro R, Giovannini L, Bonifacio S, Parrini D, Pelo E, Mannelli F, Guglielmelli P, Vannucchi AM "Nano-GLADIATOR: real-time detection of copy number alterations from nanopore sequencing data." Bioinformatics. 2019 Apr 5. https://doi.org/10.1093/bioinformatics/btz241
PMID: 30949684


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