NanoStringNormCNV is a tool for pre-processing and copy number variation (CNV) calling from NanoString data. The algorithm obtains a cohort mean by computing sample averages and normalized to obtain sample-specific data. It detects CNVs from count ratios of probes or genes and uses kernel density to compute thresholds, that are either set or dynamically computed range for pooled reference.
DNA structural variation; Sequence analysis; Nucleic acid sites, features and motifs
Sendorek DH, Lalonde E, Yao CQ, Sabelnykova VY, Bristow RG, Boutros PC "NanoStringNormCNV: pre-processing of NanoString CNV data." Bioinformatics. 2018 Mar 15;34(6):1034-1036. https://doi.org/10.1093/bioinformatics/btx707
If you find errors, please report here.
Find thousands of Bioinformatics and Life Science software tools and databases in the newly launched