SubPatCNV is a tool for discovery/identification of copy number variable (CNV) regions larger than a set threshold. The algorithm uses approximate pattern matching for the identification of CNVs.
Genetic variation; Nucleic acids; Nucleic acid sites, features and motifs
Johnson N, Zhang H, Fang G, Kumar V, Kuang R "SubPatCNV: approximate subspace pattern mining for mapping copy-number variations." BMC Bioinformatics. 2015 Jan 16;16:16. https://doi.org/10.1186/S12859-014-0426-7
PMID: 25591662
PMCID: PMC4305219
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