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A tool for visualizing copy number variation (CNV) and single nucleotide polymorphism (SNP) data. VCS can visualize the enrichment of genome contents in CNV, CNV and/or SNP physical distribution, the log 2 CNV distribution ratio, the number of CNVs and SNPs per binning, homozygosity distribution of genotypes, and a cytomap of genes.


Genetic variation


  • Operation: Visualisation
  • Software interface: Web user interface
  • Language: -
  • Operating system: Linux; MAC OS X; Microsoft Windows
  • License: Not stated
  • Cost: Free
  • Version name: -
  • Maturity: Legacy
  • Credit: The Next-Generation BioGreen 21 Program (No. PJ008116), Rural Development Administration, Republic of Korea.
  • Contact: Heebal Kim heebal _at_ | Kangseok Seo sks _at_
  • Collection: -


Kim H, Sung S, Cho S, Kim TH, Seo K, Kim H "VCS: Tool for Visualizing Copy Number Variation and Single Nucleotide Polymorphism." Asian-Australas J Anim Sci. 2014 Dec;27(12):1691-4.
PMID: 25358361
PMCID: PMC4213679

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