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cnvCapSeq
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cnvCapSeq

cnvCapSeq is a tool to detect copy number variation (CNV) and to genotype using long-range targeted resequencing.



cnvCapSeq

cnvCapSeq is a tool to detect copy number variation (CNV) and to genotype using long-range targeted resequencing.

Topic

Genetics; genetic variation

Details

  • Operation: Genetic variation analysis
  • Software interface: Command-line user interface
  • Language: Java
  • Operating system: Linux; Mac OS X,Microsoft Windows
  • License: GNU General Public License v3
    • Cost: Free
  • Version name: 0.1.2
  • Credit: European Union's seventh Framework program (EUCLIDS), Australian Research Council Future Fellowship, Agency for Science and Technology and Research of Singapore (A*STAR), Imperial College Open Access Publication Fund.
  • Contact: Lachlan J. M. Coin l.coin _at_ imb.uq.edu.au | Sonia Davila sonia _at_ gis.a-star.edu.sg | Evangelos Bellos evangelos.bellos09 _at_ imperial.ac.uk
  • Collection: -

Publications

Bellos E, Kumar V, Lin C, Maggi J, Phua ZY, Cheng CY, Cheung CM, Hibberd ML, Wong TY, Coin LJ, Davila S "cnvCapSeq: detecting copy number variation in long-range targeted resequencing data." Nucleic Acids Res. 2014 Nov 10;42(20):e158. Epub 2014 Sep 16. https://doi.org/10.1093/nar/gku849
PMID: 25228465
PMCID: PMC4227763


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