3DSNP

A database linking noncoding SNPs to 3D interacting genes.

Topic

Biology, Genetics, Genotype and phenotype, Genetic variation

Details

Operation: Prediction and recognition, Query and retrieval, Database search, Visualisation
Software interface: Web user interface
Language: -
License: Not stated

Cost

Version name: -

Credit: Lu Y, Quan C, Chen H, Bo X, Zhang C.
Contact: ylu.phd at gmail.com, ksak607155 at163.com
Collection: -

Publications

Lu Y, Quan C, Chen H, Bo X, Zhang C "3DSNP: a database for linking human noncoding SNPs to their three-dimensional interacting genes." Nucleic Acids Res. 2017; 45(D1):D643-D649 https://doi.org/10.1093/nar/gkw1022
PMID: 27789693
PMCID: PMC5210526

Download and documentation

Documentation: http://cbportal.org/3dsnp/documentation/
api/
Home page: http://biotech.bmi.ac.cn/3dsnp/

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3DSNP

3DSNP

Topic

Details

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Download and documentation

TOOLS

1. SNP Tools

2. GWAS Tools

3. Genotype Imputation Tools

4. MSA tools

5. CNV tools

6. WGA tools

7. RNA-seq tools

8. Proteomics Tools

9. Nucleic Acid Structure Analysis Tools

10. Nucleic Acid Sequence Analysis Tools

11. Sequence Logo Tools

12. In-house Software Tools