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AnnTools

A tool annotating single nucleotide substitutions (SNP/SNV), indels, and copy number variations (CNV) in sequencing and microarray data.

Topic

Biology, Genetics, DNA polymorphism

Details

Operation: Sequence annotation, Genome annotation, SNP annotation
Software interface: Command-line interface
Language: Python
Operating system: Linux, Microsoft Windows, Mac OS X
License: BSD License

Cost

Version name: 1.1

Credit: Makarov V, O'Grady T, Cai G, Lihm J, Buxbaum JD, Yoon S.
Contact: makarovv at gmail.com
Collection: -

Publications

Makarov V, O'Grady T, Cai G, Lihm J, Buxbaum JD, Yoon S "AnnTools: a comprehensive and versatile annotation toolkit for genomic variants." Bioinformatics 2012; 28(5):724-5 https://doi.org/10.1093/bioinformatics/bts032
PMID: 22257670
PMCID: PMC3289923

Download and documentation

Source: http://anntools.sourceforge.net/
Documentation: http://anntools.sourceforge.net/pdf/user
_manual.pdf
Home page: http://anntools.sourceforge.net/

If you find errors, please report here.

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