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ArrayFusion

ArrayFusion

A tool to annotate CGH results and microarray data from a range of platforms, such as cDNA, expression, exon, SNP, array-CGH and ChIP-on-chip. It converts the data into standard formats that can be visualized in Affymetrix Integrated Genome Browser and GBrowse in the HapMap Project.

Topic

Biology, Genetics, DNA polymorphism

Details

  • Operation: Visuaisation, Sequence annotation, SNP annotation
  • Software interface: Web user interface
  • Language: -
  • License: Not stated
  • Cost: Free
  • Version name: 1.5.7
  • Credit: Yang TP, Chang TY, Lin CH, Hsu MT, Wang HW.
  • Contact: Dr Hsei-Wei Wang hwwang at ym.edu.tw, Mr Ting-Yu Chang d49402002 at ym.edu.tw, Mr Tsun-Po Yang tsunpo at yahoo.com
  • Collection: -

Publications

Yang TP, Chang TY, Lin CH, Hsu MT, Wang HW "ArrayFusion: a web application for multi-dimensional analysis of CGH, SNP and microarray data." Bioinformatics 2006; 22(21):2697-8 https://doi.org/10.1093/bioinformatics/btl457
PMID: 16935928


Download and documentation




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