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CSI Phylogeny

CSI Phylogeny

Single nucleotide polymorphism detection and construction of a phylogenetic tree.

Topic

Phylogenetics, DNA polymorphism

Details

  • Operation: Sequence, Phylogenetic tree generation, Phylogenetic tree
  • Software interface: Web user interface
  • Language: -
  • Operating system: Linux, Mac OS X, Microsoft Windows
  • License: Other
  • Cost: Free
  • Version name: 1.4
  • Maturity: Emerging
  • Credit: Rolf S. Kaas, Pimlapas Leekitcharoenphon, Frank M. Aarestrup, Ole Lund
  • Contact: http://www.bioinformatics.dtu.dk/english/Service/Contact
  • Collection: -

Publications

Kaas RS, Leekitcharoenphon P, Aarestrup FM, Lund O "Solving the problem of comparing whole bacterial genomes across different sequencing platforms." PLoS ONE 2014; 9(8):e104984 https://doi.org/10.1371/journal.pone.0104984
PMID: 25110940
PMCID: PMC4128722


Download and documentation




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