CSI Phylogeny

Single nucleotide polymorphism detection and construction of a phylogenetic tree.

Topic

Phylogenetics, DNA polymorphism

Details

Operation: Sequence, Phylogenetic tree generation, Phylogenetic tree
Software interface: Web user interface
Language: -
Operating system: Linux, Mac OS X, Microsoft Windows
License: Other

Cost

Version name: 1.4

Maturity:

Credit: Rolf S. Kaas, Pimlapas Leekitcharoenphon, Frank M. Aarestrup, Ole Lund
Contact: http://www.bioinformatics.dtu.dk/english/Service/Contact
Collection: -

Publications

Kaas RS, Leekitcharoenphon P, Aarestrup FM, Lund O "Solving the problem of comparing whole bacterial genomes across different sequencing platforms." PLoS ONE 2014; 9(8):e104984 https://doi.org/10.1371/journal.pone.0104984
PMID: 25110940
PMCID: PMC4128722

Download and documentation

Documentation: https://cge.cbs.dtu.dk/services/snpTree/
instructions.php
Home page: https://cge.cbs.dtu.dk/services/snpTree/

CSI Phylogeny

CSI Phylogeny

Topic

Details

Publications

Download and documentation

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