A desktop virtual machine providing several automated microbial genomics analysis pipelines, such as 16S, whole genome and metagenome sequence analyses. It also supports use of remote cloud computing resources.
Biology, Genetics, Microbiology, Computational biology, Sequence analysis
Agrawal S, Arze C, Adkins RS, Crabtree J, Riley D, Vangala M, Galens K, Fraser CM, Tettelin H, White O, Angiuoli SV, Mahurkar A, Fricke WF "CloVR-Comparative: automated, cloud-enabled comparative microbial genome sequence analysis pipeline." BMC Genomics 2017; 18(1):332 https://doi.org/10.1186/s12864-017-3717-3
PMID: 28449639
PMCID: PMC5408420
Angiuoli SV, Matalka M, Gussman A, Galens K, Vangala M, Riley DR, Arze C, White JR, White O, Fricke WF "CloVR: a virtual machine for automated and portable sequence analysis from the desktop using cloud computing." BMC Bioinformatics 2011 https://doi.org/10.1186/1471-2105-12-356
PMID: 21878105
PMCID: PMC3228541
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