ECOGEMS is a tool to compress into sparse matrices and retrieve SNP data for rice. ECOGEMS has a graphical interface for visualization and downloading SNP data.
Genetic variation; DNA polymorphism; Database management; Model organisms
Yao W, Huang F, Zhang X, Tang J "ECOGEMS: efficient compression and retrieve of SNP data of 2058 rice accessions with integer sparse matrices." Bioinformatics. 2019 Oct 15;35(20):4181-4183. https://doi.org/10.1093/bioinformatics/btz186
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