FitTetra and fitPoly

A genotype calling tools for tetraploid and polyploid species with multiple population and parental data support.

Topic

Biology, Genetics, DNA polymorphism

Details

Operation: Genetic variation analysis, Genotyping
Software interface: Command-line interface
Language: R
Operating system: Linux, Mac OS X, Microsoft Windows
License: GNU GLP v2

Cost

Version name: 3.0.0

Credit: Zych K, Gort G, Maliepaard CA, Jansen RC, Voorrips RE.
Contact: Roeland E. Voorrips roeland.voorrips at wur.nl
Collection: -

Publications

Zych K, Gort G, Maliepaard CA, Jansen RC, Voorrips RE "FitTetra 2.0 - improved genotype calling for tetraploids with multiple population and parental data support." BMC Bioinformatics 2019; 20(1):148 https://doi.org/10.1186/s12859-019-2703-y
PMID: 30894135
PMCID: PMC6425654

Download and documentation

Source: https://cran.r-project.org/src/contrib/f
itPoly_3.0.0.tar.gz
Documentation: https://cran.r-project.org/web/packages/
fitPoly/fitPoly.pdf
Home page: https://cran.r-project.org/web/packages/
fitPoly/index.html

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FitTetra and fitPoly

FitTetra and fitPoly

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Download and documentation

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