For better experience, turn on JavaScript!



A model-based method for inferring ROH in genome-wide SNP datasets with population-specific parameters and a genotyping error rate. A classification module to identify biologically interesting classes of ROH.


Genomics, Genotyping experiment, Genotype and phenotype



Szpiech ZA, Blant A, Pemberton TJ "GARLIC: Genomic Autozygosity Regions Likelihood-based Inference and Classification." Bioinformatics 2017; 33(13):2059-2062
PMID: 28205676
PMCID: PMC5870576

Pemberton TJ, Absher D, Feldman MW, Myers RM, Rosenberg NA, Li JZ "Genomic patterns of homozygosity in worldwide human populations." Am. J. Hum. Genet. 2012; 91(2):275-92
PMID: 22883143
PMCID: PMC3415543

Download and documentation

If you find errors, please report here.