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GLANET

GLANET

A sequence annotation and enrichment analysis tool for GC content, assessment of impact of single nucleotide variants (SNPs) on TF binding sites and regulation based pathway enrichment analysis.

Topic

Biology, Genetics, DNA polymorphism

Details

  • Operation: Sequence annotation
  • Software interface: Command-line interface
  • Language: Java, Perl
  • Operating system: Microsoft Windows, Mac OS X, Linux
  • License: Other
  • Cost: Free
  • Version name: -
  • Credit: Otlu B, Firtina C, Keles S, Tastan O.
  • Contact: Bur├žak Otlu burcak at ceng.metu.edu.tr
  • Collection: -

Publications

Otlu B, Firtina C, Keles S, Tastan O "GLANET: genomic loci annotation and enrichment tool." Bioinformatics 2017; 33(18):2818-2828 https://doi.org/10.1093/bioinformatics/btx326
PMID: 28541490
PMCID: PMC6355098


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