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GeneMarker HTS

GeneMarker HTS

A workflow for forensic and medical research mitochondrial DNA data analysis from massively parallel sequencing (MPS) systems. Generates an exportable consensus mtDNA sequence that produces phylogenetically correct SNP and INDEL calls using a customizable motif-based alignment algorithm.

Topic

Biology, Genetics, Molecular genetics, Genetic variation, DNA polymorphism

Details

  • Operation: Genetic variation analysis, Polymorphism detection, SNP detection
  • Software interface: Desktop graphical user interface
  • Language: -
  • Operating system: Microsoft Windows
  • License: Not stated
  • Cost: 30 day free trial
  • Version name: -
  • Credit: Holland MM, Pack ED, McElhoe JA.
  • Contact: info _at_ softgenetics.com
  • Collection: -

Publications

Holland MM, Pack ED, McElhoe JA "Evaluation of GeneMarker" Forensic Sci Int Genet 2017 https://doi.org/10.1016/j.fsigen.2017.01.016
PMID: 28193506


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