SNP calling in low coverage NGS data, aligned to the reference genome sequences. Heap determines genotypes and calls SNPs.
Genetics, Sequencing, DNA polymorphism, Genetic variation
Kobayashi M, Ohyanagi H, Takanashi H, Asano S, Kudo T, Kajiya-Kanegae H, Nagano AJ, Tainaka H, Tokunaga T, Sazuka T, Iwata H, Tsutsumi N, Yano K "Heap: a highly sensitive and accurate SNP detection tool for low-coverage high-throughput sequencing data." DNA Res. 2017; 24(4):397-405 https://doi.org/10.1093/dnares/dsx012
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