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IBDfinder and SNPsetter

IBDfinder and SNPsetter

Tools to display graphical plots identifying runs of homozygous single nucleotide polymorphisms (SNPs) in Affymetrix SNP chip data.

Topic

Biology, Genetics, DNA polymorphism

Details

  • Operation: Visualisation
  • Software interface: Command-line interface
  • Language: Visual Basic
  • Operating system: Microsoft Windows
  • License: Not stated
  • Cost: Free
  • Version name: -
  • Credit: Carr IM, Sheridan E, Hayward BE, Markham AF, Bonthron DT.
  • Contact: Ian M. Carr i.m.carr at leeds.ac.uk
  • Collection: -

Publications

Carr IM, Sheridan E, Hayward BE, Markham AF, Bonthron DT "IBDfinder and SNPsetter: tools for pedigree-independent identification of autozygous regions in individuals with recessive inherited disease." Hum. Mutat. 2009; 30(6):960-7 https://doi.org/10.1002/humu.20974
PMID: 19405095


Download and documentation




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