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A pipeline integrating several open source next generation sequencing (NGS) tools along with a graphical user interface called Integrated SNP Mining and Utilization (ISMU) for SNP discovery and their utilization by developing genotyping assays.


Biology, Genetics, Genetic variation



Azam S, Rathore A, Shah TM, Telluri M, Amindala B, Ruperao P, Katta MA, Varshney RK "An integrated SNP mining and utilization (ISMU) pipeline for next generation sequencing data." PLoS ONE 2014; 9(7):e101754
PMID: 25003610
PMCID: PMC4086967

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