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ITALICS

ITALICS

A tool to normalize Affymetrix GeneChip Human Mapping 100K and 500K sets.

Topic

DNA, Mapping

Details

  • Operation: Standardisation and normalisation
  • Software interface: Command-line interface, library
  • Language: R
  • Operating system: Linux, Microsoft Windows, Mac OS X
  • License: GNU GPL v2
  • Cost: -
  • Version name: 2.34.0
  • Credit: Rigaill G, Hupé P, Almeida A, La Rosa P, Meyniel JP, Decraene C, Barillot E.
  • Contact: Guillem Rigaill italics at curie.fr
  • Collection: -

Publications

Rigaill G, Hupé P, Almeida A, La Rosa P, Meyniel JP, Decraene C, Barillot E "ITALICS: an algorithm for normalization and DNA copy number calling for Affymetrix SNP arrays." Bioinformatics 2008; 24(6):768-74 https://doi.org/10.1093/bioinformatics/btn048
PMID: 18252739


Download and documentation




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