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LDlink

LDlink

A suite of web applications to assess haplotype structures and linkage of funtional variants.

Topic

Genetics, Population genetics, Whole genome sequencing

Details

  • Operation: Linkage disequilibrium calculation
  • Software interface: Web user interface
  • Language: -
  • License: Not stated
  • Cost: Free
  • Version name: 3.5
  • Maturity: Stable
  • Credit: Machiela MJ, Chanock SJ.
  • Contact: NCILDlinkWebAdmin at mail.nih.gov
  • Collection: -

Publications

Machiela MJ, Chanock SJ "LDlink: a web-based application for exploring population-specific haplotype structure and linking correlated alleles of possible functional variants." Bioinformatics 2015; 31(21):3555-7 https://doi.org/10.1093/bioinformatics/btv402
PMID: 26139635
PMCID: PMC4626747


Machiela MJ, Chanock SJ "LDassoc: an online tool for interactively exploring genome-wide association study results and prioritizing variants for functional investigation." Bioinformatics 2018; 34(5):887-889 https://doi.org/10.1093/bioinformatics/btx561
PMID: 28968746
PMCID: PMC6030966


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