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Ohana

Admixture analysis and population tree estimation for SNP and NGS data.

Topic

DNA polymorphism, Sequencing, Sequence analysis

Details

Operation: SNP detection
Software interface: Command-line interface
Language: C++
Operating system: Linux, Mac OS X
License: Other

Cost

Version name: -

Credit: Cheng JY
Contact: Jade.cheng at birc.au.dk
Collection: -

Publications

Cheng JY, Mailund T, Nielsen R "Fast admixture analysis and population tree estimation for SNP and NGS data." Bioinformatics 2017; 33(14):2148-2155 https://doi.org/10.1093/bioinformatics/btx098
PMID: 28334108
PMCID: PMC6543773

Download and documentation

Source: https://github.com/jade-cheng/ohana
Documentation: https://github.com/jade-cheng/ohana
Home page: https://github.com/jade-cheng/ohana

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