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RExPrimer

RExPrimer

A web tool for PCR primer design. It increases effectiveness by avoiding 3' SNPs.

Topic

Nucleic acid sites, features and motifs, Sequence assembly, Probes and primers

Details

  • Operation: PCR primer design
  • Software interface: Web user interface
  • Language: Python
  • Operating system: Linux, Microsoft Windows, Mac OS X
  • License: Not stated
  • Cost: Free
  • Version name: -
  • Credit: Piriyapongsa J, Ngamphiw C, Assawamakin A, Wangkumhang P, Suwannasri P, Ruangrit U, Agavatpanitch G, Tongsima S.
  • Contact: chumpol.nga at biotec.or.th
  • Collection: -

Publications

Piriyapongsa J, Ngamphiw C, Assawamakin A, Wangkumhang P, Suwannasri P, Ruangrit U, Agavatpanitch G, Tongsima S. "RExPrimer: an integrated primer designing tool increases PCR effectiveness by avoiding 3' SNP-in-primer and mis-priming from structural variation." BMC Genomics 2009 Dec;10 Suppl 3():S4. https://doi.org/10.1186/1471-2164-10-S3-S4
PMID: 19958502
PMCID: PMC2788391


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