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SNP-RFLPing

SNP-RFLPing

Mining of restriction enzyme sites. Provides PCR-RFLP information with multiple functionality about SNPs; SNP retrieval to multiple species, polymorphism types - bi-allelic, tri-allelic, tetra-allelic or indels. Gene-centric searching, HapMap tagSNPs, and gene ontology-based searching - miRNAs, and SNP500Cancer.

Topic

Biology, Genetics

Details

  • Operation: Sequence feature detection, Restriction site recognition
  • Software interface: Web user interface
  • Language: -
  • License: Not stated
  • Cost: -
  • Version name: -
  • Credit: Chang HW, Cheng YH, Chuang LY, Yang CH.
  • Contact: -
  • Collection: -

Publications

Chang HW, Cheng YH, Chuang LY, Yang CH "SNP-RFLPing 2: an updated and integrated PCR-RFLP tool for SNP genotyping." BMC Bioinformatics 2010 https://doi.org/10.1186/1471-2105-11-173
PMID: 20377871
PMCID: PMC2858040


Download and documentation

Currently not available or not maintained.




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