SNP-VISTA

SNP-VISTA consists of two versions: GeneSNPVISTA for mapping single nucleotide polymorphism (SNP) and EcoSNP-VISTA detects homologous recombination points in microbial populations.

Topic

Gene transcripts, Mapping, Genetic variation

Details

Operation: Sequence alignment, Visualization
Software interface: Desktop graphical user interface
Language: Java
Operating system: Linux, Mac OS X, Microsoft Windows
License: Not stated

Cost

Version name: -

Maturity:

Credit: Shah N, Teplitsky MV, Minovitsky S, Pennacchio LA, Hugenholtz P, Hamann B, Dubchak IL.
Contact: -
Collection: -

Publications

Shah N, Teplitsky MV, Minovitsky S, Pennacchio LA, Hugenholtz P, Hamann B, Dubchak IL "SNP-VISTA: an interactive SNP visualization tool." BMC Bioinformatics 2005 https://doi.org/10.1186/1471-2105-6-292
PMID: 16336665
PMCID: PMC1325058

Download and documentation

Source: http://genome.lbl.gov/vista/downloads.sh
tml
Home page: http://genome.lbl.gov/vista/snpvista/

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SNP-VISTA

SNP-VISTA

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Download and documentation

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