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SNP-VISTA

SNP-VISTA

SNP-VISTA consists of two versions: GeneSNPVISTA for mapping single nucleotide polymorphism (SNP) and EcoSNP-VISTA detects homologous recombination points in microbial populations.

Topic

Gene transcripts, Mapping, Genetic variation

Details

  • Operation: Sequence alignment, Visualization
  • Software interface: Desktop graphical user interface
  • Language: Java
  • Operating system: Linux, Mac OS X, Microsoft Windows
  • License: Not stated
  • Cost: -
  • Version name: -
  • Maturity: Stable
  • Credit: Shah N, Teplitsky MV, Minovitsky S, Pennacchio LA, Hugenholtz P, Hamann B, Dubchak IL.
  • Contact: -
  • Collection: -

Publications

Shah N, Teplitsky MV, Minovitsky S, Pennacchio LA, Hugenholtz P, Hamann B, Dubchak IL "SNP-VISTA: an interactive SNP visualization tool." BMC Bioinformatics 2005 https://doi.org/10.1186/1471-2105-6-292
PMID: 16336665
PMCID: PMC1325058


Download and documentation




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