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SNPinfo

SNPinfo

A web site with a sute of tools for single nucleotide polymorphism (SNP) detection. For example, SNPs affecting protein structure, gene regulation, slicing, and miRNA binding.

Topic

Functional, regulatory and non-coding RNA, DNA polymorphism, Gene regulation, Function analysis, Structure prediction

Details

  • Operation: SNP detection, Protein binding site prediction, Protein function prediction, Protein structure prediction
  • Software interface: Web user interface
  • Language: -
  • License: Not stated
  • Cost: Free
  • Version name: -
  • Credit: Xu Z, Taylor JA.
  • Contact: webcenter at niehs.nih.gov
  • Collection: -

Publications

Xu Z, Taylor JA. "SNPinfo: integrating GWAS and candidate gene information into functional SNP selection for genetic association studies." Nucleic Acids Res. 2009 Jul;37(Web Server issue):W600-5. https://doi.org/10.1093/nar/gkp290
PMID: 19417063
PMCID: PMC2703930


Download and documentation




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