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SNPsnap

SNPsnap

A Web server for SNP-based enrichment analysis. It matched SNP sets to calibrate background expectations. The tool identifies sets of randomly drawn SNPs, matched to a set of query SNPs based on allele frequency, number of SNPs in LD, distance to nearest gene, and gene density. Annotation database is available for download at the website.

Topic

Genetics, Genomics, DNA polymorphism, Data submission, annotation and curation

Details

Publications

Pers TH, Timshel P, Hirschhorn JN "SNPsnap: a Web-based tool for identification and annotation of matched SNPs." Bioinformatics 2015; 31(3):418-20 https://doi.org/10.1093/bioinformatics/btu655
PMID: 25316677
PMCID: PMC4308663


Download and documentation




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